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PGSC0003DMT400006490 PGSC0003DMT400006490 PGSC0003DMT400064019 PGSC0003DMT400064019 PGSC0003DMT400067463 PGSC0003DMT400067463 PGSC0003DMT400080958 PGSC0003DMT400080958 PGSC0003DMT400040714 PGSC0003DMT400040714 PGSC0003DMT400041326 PGSC0003DMT400041326 PGSC0003DMT400003265 PGSC0003DMT400003265 PGSC0003DMT400004550 PGSC0003DMT400004550 PGSC0003DMT400034845 PGSC0003DMT400034845 PGSC0003DMT400011188 PGSC0003DMT400011188 PGSC0003DMT400046728 PGSC0003DMT400046728
"PGSC0003DMT400011188" - Phytophthora-inhibited protease 1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400011188Phytophthora-inhibited protease 1 (348 aa)    
Predicted Functional Partners:
PGSC0003DMT400006490
SEC13 family protein (301 aa)
       
    0.525
PGSC0003DMT400003265
Protein transport SEC13 (302 aa)
       
    0.525
PGSC0003DMT400080958
Protein transport protein Sec23 (764 aa)
     
 
    0.508
PGSC0003DMT400040714
Protein transport protein sec23 (784 aa)
     
 
    0.508
PGSC0003DMT400034845
Protein transport protein sec23 (246 aa)
     
 
    0.508
PGSC0003DMT400004550
Protein transport protein sec23 (228 aa)
     
 
    0.508
PGSC0003DMT400046728
Vacuolar protein sorting (189 aa)
         
  0.464
PGSC0003DMT400067463
Small GTP-binding protein (203 aa)
         
  0.462
PGSC0003DMT400064019
Small GTP-binding protein (202 aa)
         
  0.462
PGSC0003DMT400041326
Small GTP-binding protein (203 aa)
         
  0.462
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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