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PGSC0003DMT400097258 PGSC0003DMT400097258 PGSC0003DMT400070042 PGSC0003DMT400070042 PGSC0003DMT400073948 PGSC0003DMT400073948 PGSC0003DMT400011199 PGSC0003DMT400011199 PGSC0003DMT400074929 PGSC0003DMT400074929 PGSC0003DMT400070780 PGSC0003DMT400070780 PGSC0003DMT400036917 PGSC0003DMT400036917 PGSC0003DMT400037148 PGSC0003DMT400037148 PGSC0003DMT400040682 PGSC0003DMT400040682 PGSC0003DMT400047881 PGSC0003DMT400047881 PGSC0003DMT400063984 PGSC0003DMT400063984
"PGSC0003DMT400011199" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400011199Conserved gene of unknown function (563 aa)    
Predicted Functional Partners:
PGSC0003DMT400074929
Acid phosphatase 1 (268 aa)
           
  0.515
PGSC0003DMT400037148
Sugar isomerase domain-containing protein (202 aa)
           
  0.515
PGSC0003DMT400036917
Amidase (624 aa)
           
  0.515
PGSC0003DMT400063984
Conserved gene of unknown function (466 aa)
           
  0.501
PGSC0003DMT400097258
Hydrolase, hydrolyzing O-glycosyl compounds (478 aa)
   
          0.424
PGSC0003DMT400073948
Subtilase family protein (841 aa)
           
  0.406
PGSC0003DMT400070780
Periplasmic beta-glucosidase (641 aa)
           
  0.406
PGSC0003DMT400070042
Hydrolase, hydrolyzing O-glycosyl compounds (631 aa)
           
  0.406
PGSC0003DMT400047881
Glycosyl transferase family 17 protein (397 aa)
           
  0.406
PGSC0003DMT400040682
Acetylglucosaminyltransferase (388 aa)
           
  0.406
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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