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PGSC0003DMT400063026 PGSC0003DMT400063026 PGSC0003DMT400011492 PGSC0003DMT400011492 PGSC0003DMT400050572 PGSC0003DMT400050572
"PGSC0003DMT400011492" - AP2/ERF domain-containing transcription factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PGSC0003DMT400011492AP2/ERF domain-containing transcription factor (254 aa)    
Predicted Functional Partners:
PGSC0003DMT400063026
Transcription factor BIM1 (536 aa)
       
 
  0.405
PGSC0003DMT400050572
BHLH domain class transcription factor (321 aa)
       
 
  0.405
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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