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PGSC0003DMT400045610 PGSC0003DMT400045610 PGSC0003DMT400011555 PGSC0003DMT400011555 PGSC0003DMT400014393 PGSC0003DMT400014393 PGSC0003DMT400047012 PGSC0003DMT400047012
"PGSC0003DMT400011555" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400011555Conserved gene of unknown function (178 aa)    
Predicted Functional Partners:
PGSC0003DMT400047012
Histidyl-tRNA synthetase (880 aa)
     
 
  0.441
PGSC0003DMT400014393
Histidyl-tRNA synthetase (296 aa)
     
 
  0.441
PGSC0003DMT400045610
Methyltransferase/ nucleic acid binding protein (517 aa)
     
   
  0.426
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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