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PGSC0003DMT400027543 PGSC0003DMT400027543 PGSC0003DMT400011756 PGSC0003DMT400011756 PGSC0003DMT400003667 PGSC0003DMT400003667 PGSC0003DMT400034455 PGSC0003DMT400034455
"PGSC0003DMT400011756" - F-box family protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400011756F-box family protein (360 aa)    
Predicted Functional Partners:
PGSC0003DMT400027543
F-box family protein (381 aa)
           
  0.515
PGSC0003DMT400003667
F-box family protein (250 aa)
           
  0.515
PGSC0003DMT400034455
Ubiquitin-protein ligase (439 aa)
           
  0.400
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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