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PGSC0003DMT400081991 PGSC0003DMT400081991 PGSC0003DMT400081863 PGSC0003DMT400081863 PGSC0003DMT400011833 PGSC0003DMT400011833 PGSC0003DMT400068948 PGSC0003DMT400068948 PGSC0003DMT400003012 PGSC0003DMT400003012 PGSC0003DMT400044311 PGSC0003DMT400044311 PGSC0003DMT400015673 PGSC0003DMT400015673 PGSC0003DMT400044312 PGSC0003DMT400044312 PGSC0003DMT400018358 PGSC0003DMT400018358 PGSC0003DMT400001225 PGSC0003DMT400001225 PGSC0003DMT400012041 PGSC0003DMT400012041
"PGSC0003DMT400011833" - GTP binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400011833GTP binding protein (362 aa)    
Predicted Functional Partners:
PGSC0003DMT400015673
Pescadillo; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (618 aa)
     
 
  0.952
PGSC0003DMT400018358
RNA binding protein (217 aa)
     
      0.941
PGSC0003DMT400001225
RNA binding protein (216 aa)
     
      0.941
PGSC0003DMT400068948
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (680 aa)
     
 
  0.941
PGSC0003DMT400044312
Nucleolar GTP-binding protein (201 aa)
     
 
  0.941
PGSC0003DMT400044311
Nucleolar GTP-binding protein (207 aa)
     
 
  0.941
PGSC0003DMT400003012
Conserved gene of unknown function (620 aa)
     
      0.919
PGSC0003DMT400081991
RRNA-processing protein EBP2 (291 aa)
     
 
  0.898
PGSC0003DMT400081863
RRNA-processing protein EBP2 (298 aa)
     
 
  0.898
PGSC0003DMT400012041
Dentin sialophosphoprotein (816 aa)
     
      0.892
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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