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PGSC0003DMT400061282 PGSC0003DMT400061282 PGSC0003DMT400059840 PGSC0003DMT400059840 PGSC0003DMT400082493 PGSC0003DMT400082493 PGSC0003DMT400017646 PGSC0003DMT400017646 PGSC0003DMT400040392 PGSC0003DMT400040392 PGSC0003DMT400043119 PGSC0003DMT400043119 PGSC0003DMT400011931 PGSC0003DMT400011931 PGSC0003DMT400010758 PGSC0003DMT400010758 PGSC0003DMT400037705 PGSC0003DMT400037705 PGSC0003DMT400031869 PGSC0003DMT400031869 PGSC0003DMT400018162 PGSC0003DMT400018162
"PGSC0003DMT400011931" - 50S ribosomal protein L18, chloroplast in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40001193150S ribosomal protein L18, chloroplast (162 aa)    
Predicted Functional Partners:
PGSC0003DMT400059840
60S ribosomal protein L27 (118 aa)
   
  0.999
PGSC0003DMT400010758
60S ribosomal protein L27 (222 aa)
   
  0.999
PGSC0003DMT400037705
50S ribosomal protein L15 (276 aa)
 
  0.999
PGSC0003DMT400017646
Ribosomal protein (341 aa)
 
  0.999
PGSC0003DMT400031869
PRPL11 (PLASTID RIBOSOMAL PROTEIN L11) (217 aa)
 
  0.999
PGSC0003DMT400043119
60S ribosomal protein L10, mitochondrial (282 aa)
 
  0.999
PGSC0003DMT400082493
50S ribosomal protein L10, chloroplastic (229 aa)
 
  0.999
PGSC0003DMT400061282
EMB2394 (EMBRYO DEFECTIVE 2394) (227 aa)
 
  0.999
PGSC0003DMT400040392
Gene of unknown function (280 aa)
 
  0.999
PGSC0003DMT400018162
50S ribosomal protein L4, chloroplastic (350 aa)
 
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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