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PGSC0003DMT400083089 PGSC0003DMT400083089 PGSC0003DMT400083940 PGSC0003DMT400083940 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400079665 PGSC0003DMT400079665 PGSC0003DMT400078706 PGSC0003DMT400078706 PGSC0003DMT400011736 PGSC0003DMT400011736 PGSC0003DMT400073281 PGSC0003DMT400073281 PGSC0003DMT400074009 PGSC0003DMT400074009 PGSC0003DMT400011956 PGSC0003DMT400011956 CNX5 CNX5 PGSC0003DMT400008762 PGSC0003DMT400008762
"PGSC0003DMT400011956" - Ubiquitin-conjugating enzyme, E2 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
PGSC0003DMT400011956Ubiquitin-conjugating enzyme, E2 (321 aa)    
Predicted Functional Partners:
PGSC0003DMT400074009
Molybdopterin synthase sulphurylase (286 aa)
       
  0.925
CNX5
Molybdopterin synthase sulphurylase; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is gener [...] (460 aa)
       
  0.925
PGSC0003DMT400008762
RING finger protein (215 aa)
       
  0.845
PGSC0003DMT400011736
Ubiquitin extension protein (181 aa)
       
  0.819
PGSC0003DMT400083940
Serine-threonine protein kinase, plant-type (862 aa)
       
  0.794
PGSC0003DMT400083089
Brassinosteroid LRR receptor kinase (1106 aa)
       
  0.794
PGSC0003DMT400079665
Transmembrane protein kinase (748 aa)
       
  0.794
PGSC0003DMT400078706
Receptor protein kinase CLAVATA1 (1017 aa)
       
  0.794
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
       
  0.794
PGSC0003DMT400073281
Conserved gene of unknown function (1160 aa)
       
  0.794
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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