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PGSC0003DMT400015585 PGSC0003DMT400015585 PGSC0003DMT400072666 PGSC0003DMT400072666 TYKY1 TYKY1 PGSC0003DMT400072665 PGSC0003DMT400072665 PGSC0003DMT400011966 PGSC0003DMT400011966 TYKY2 TYKY2 PGSC0003DMT400060733 PGSC0003DMT400060733 PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400072398 PGSC0003DMT400072398 PGSC0003DMT400048935 PGSC0003DMT400048935 PGSC0003DMT400048932 PGSC0003DMT400048932
"PGSC0003DMT400011966" - 4Fe-4S ferredoxin, iron-sulfur binding in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT4000119664Fe-4S ferredoxin, iron-sulfur binding (407 aa)    
Predicted Functional Partners:
TYKY1
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). May donate electrons to ubiquinone (229 aa)
   
  0.749
TYKY2
NADH-ubiquinone oxidoreductase (229 aa)
   
  0.749
PGSC0003DMT400015585
Conserved gene of unknown function (260 aa)
 
          0.680
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
   
   
  0.649
PGSC0003DMT400072666
Glutamate-ammonia ligase (847 aa)
       
  0.614
PGSC0003DMT400072665
Glutamate-ammonia ligase (353 aa)
       
  0.556
PGSC0003DMT400072398
Glutamate-ammonia ligase (469 aa)
       
  0.556
PGSC0003DMT400060733
Glutamine synthetase (356 aa)
       
  0.556
PGSC0003DMT400048935
Glutamate-ammonia ligase (269 aa)
       
  0.556
PGSC0003DMT400048932
Glutamate-ammonia ligase (176 aa)
       
  0.556
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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