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PGSC0003DMT400018680 PGSC0003DMT400018680 PGSC0003DMT400070292 PGSC0003DMT400070292 PGSC0003DMT400029780 PGSC0003DMT400029780 PGSC0003DMT400009821 PGSC0003DMT400009821 PGSC0003DMT400029782 PGSC0003DMT400029782 PGSC0003DMT400012151 PGSC0003DMT400012151 PGSC0003DMT400060328 PGSC0003DMT400060328 PGSC0003DMT400076609 PGSC0003DMT400076609 PGSC0003DMT400019706 PGSC0003DMT400019706 PGSC0003DMT400029019 PGSC0003DMT400029019 PGSC0003DMT400028367 PGSC0003DMT400028367
"PGSC0003DMT400012151" - DNA-directed RNA polymerase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400012151DNA-directed RNA polymerase (657 aa)    
Predicted Functional Partners:
PGSC0003DMT400029782
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1151 aa)
     
  0.985
PGSC0003DMT400029780
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1153 aa)
     
  0.985
PGSC0003DMT400028367
DNA binding protein (286 aa)
     
  0.984
PGSC0003DMT400018680
DNA binding protein (368 aa)
     
  0.984
PGSC0003DMT400060328
DNA-directed RNA polymerase III; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (111 aa)
       
  0.983
PGSC0003DMT400070292
Conserved gene of unknown function (173 aa)
     
  0.983
PGSC0003DMT400076609
DNA-directed RNA polymerase I/III subunits (393 aa)
     
  0.983
PGSC0003DMT400029019
DNA-directed RNA polymerase III 25 kD polypeptide (204 aa)
     
  0.983
PGSC0003DMT400019706
DNA-directed RNA polymerase III subunit F (237 aa)
     
  0.983
PGSC0003DMT400009821
DNA-directed RNA polymerase III subunit F (241 aa)
     
  0.983
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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