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PGSC0003DMT400040907 PGSC0003DMT400040907 PGSC0003DMT400014441 PGSC0003DMT400014441 PGSC0003DMT400042540 PGSC0003DMT400042540 PGSC0003DMT400062962 PGSC0003DMT400062962 PGSC0003DMT400014421 PGSC0003DMT400014421 PGSC0003DMT400012262 PGSC0003DMT400012262 PGSC0003DMT400060430 PGSC0003DMT400060430 PGSC0003DMT400009629 PGSC0003DMT400009629 PGSC0003DMT400040902 PGSC0003DMT400040902 PGSC0003DMT400006784 PGSC0003DMT400006784 PGSC0003DMT400069685 PGSC0003DMT400069685
"PGSC0003DMT400012262" - Peroxisomal biogenesis factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400012262Peroxisomal biogenesis factor (248 aa)    
Predicted Functional Partners:
PGSC0003DMT400009629
Peroxisome biogenesis factor 10 (397 aa)
       
 
  0.958
PGSC0003DMT400069685
PEX14 protein (527 aa)
     
 
  0.956
PGSC0003DMT400062962
AtPex14p (170 aa)
     
 
  0.956
PGSC0003DMT400014441
T-complex protein 1 subunit delta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (539 aa)
       
      0.936
PGSC0003DMT400040907
Amino acid transporter (137 aa)
     
  0.931
PGSC0003DMT400040902
Amino acid transporter (364 aa)
     
  0.931
PGSC0003DMT400014421
Amino acid transporter (369 aa)
     
  0.931
PGSC0003DMT400060430
Peroxin 12; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
       
 
  0.931
PGSC0003DMT400042540
Peroxisome assembly protein (350 aa)
       
 
  0.916
PGSC0003DMT400006784
Peroxisome assembly factor 1 (302 aa)
       
 
  0.916
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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