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PGSC0003DMT400029921 PGSC0003DMT400029921 PGSC0003DMT400075275 PGSC0003DMT400075275 PGSC0003DMT400057422 PGSC0003DMT400057422 PGSC0003DMT400065926 PGSC0003DMT400065926 PGSC0003DMT400074349 PGSC0003DMT400074349 PGSC0003DMT400076353 PGSC0003DMT400076353 PGSC0003DMT400014328 PGSC0003DMT400014328 PGSC0003DMT400012398 PGSC0003DMT400012398 PGSC0003DMT400055395 PGSC0003DMT400055395 PGSC0003DMT400050569 PGSC0003DMT400050569 PGSC0003DMT400037351 PGSC0003DMT400037351
"PGSC0003DMT400012398" - TATA binding protein associated factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400012398TATA binding protein associated factor (190 aa)    
Predicted Functional Partners:
PGSC0003DMT400029921
TAFII21 (183 aa)
     
  0.987
PGSC0003DMT400050569
TATA binding protein associated factor 24kDa subunit (210 aa)
     
  0.987
PGSC0003DMT400075275
Transcription factor (138 aa)
     
  0.986
PGSC0003DMT400055395
Transcription initiation factor (586 aa)
     
  0.986
PGSC0003DMT400057422
Transcription initiation factor tfiid (546 aa)
     
  0.981
PGSC0003DMT400037351
Transcription initiation factor tfiid (546 aa)
     
  0.981
PGSC0003DMT400074349
Ferric reductase (747 aa)
       
  0.979
PGSC0003DMT400076353
Transcription initiation factor TFIID subunit (128 aa)
       
  0.978
PGSC0003DMT400014328
Membrane alanyl aminopeptidase (576 aa)
     
  0.975
PGSC0003DMT400065926
TAF7 (TBP-ASSOCIATED FACTOR 7) (155 aa)
     
  0.973
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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