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PGSC0003DMT400053011 PGSC0003DMT400053011 PGSC0003DMT400063574 PGSC0003DMT400063574 PGSC0003DMT400038718 PGSC0003DMT400038718 PGSC0003DMT400062212 PGSC0003DMT400062212 PGSC0003DMT400062214 PGSC0003DMT400062214 PGSC0003DMT400051744 PGSC0003DMT400051744 PGSC0003DMT400078301 PGSC0003DMT400078301 PGSC0003DMT400040872 PGSC0003DMT400040872 PGSC0003DMT400015943 PGSC0003DMT400015943 PGSC0003DMT400012452 PGSC0003DMT400012452 PGSC0003DMT400053010 PGSC0003DMT400053010
"PGSC0003DMT400012452" - 26S protease regulatory subunit in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40001245226S protease regulatory subunit (119 aa)    
Predicted Functional Partners:
PGSC0003DMT400063574
26S protease regulatory subunit 6A homolog (423 aa)
     
  0.999
PGSC0003DMT400038718
ATSUG1 (433 aa)
     
  0.999
PGSC0003DMT400051744
26S proteasome subunit 4 (444 aa)
     
  0.999
PGSC0003DMT400040872
26S proteasome subunit 4 (444 aa)
     
  0.999
PGSC0003DMT400062214
26S proteasome subunit RPN7 (386 aa)
     
  0.999
PGSC0003DMT400062212
26S proteasome subunit RPN7 (143 aa)
     
  0.999
PGSC0003DMT400078301
26S protease regulatory subunit 6B homolog (414 aa)
     
  0.999
PGSC0003DMT400053011
26S protease regulatory subunit 6B homolog (77 aa)
     
  0.999
PGSC0003DMT400053010
26S protease regulatory subunit 6B homolog; The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity) (413 aa)
     
  0.999
PGSC0003DMT400015943
26S proteasome regulatory complex ATPase RPT3 (103 aa)
     
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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