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PGSC0003DMT400027838 PGSC0003DMT400027838 PGSC0003DMT400072047 PGSC0003DMT400072047 PGSC0003DMT400012718 PGSC0003DMT400012718 PGSC0003DMT400012720 PGSC0003DMT400012720 PGSC0003DMT400059235 PGSC0003DMT400059235 PGSC0003DMT400043340 PGSC0003DMT400043340 PGSC0003DMT400072046 PGSC0003DMT400072046
"PGSC0003DMT400012720" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400012720Conserved gene of unknown function (448 aa)    
Predicted Functional Partners:
PGSC0003DMT400012718
Erg28 (129 aa)
           
  0.515
PGSC0003DMT400027838
GDSL-motif lipase/hydrolase family protein (358 aa)
           
  0.482
PGSC0003DMT400072047
Conserved gene of unknown function (347 aa)
     
   
  0.440
PGSC0003DMT400072046
Conserved gene of unknown function (347 aa)
     
   
  0.440
PGSC0003DMT400059235
Conserved gene of unknown function (349 aa)
     
   
  0.440
PGSC0003DMT400043340
Phosphate-responsive 1 family protein (352 aa)
     
   
  0.440
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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