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PGSC0003DMT400080554 PGSC0003DMT400080554 PGSC0003DMT400019358 PGSC0003DMT400019358 PGSC0003DMT400071652 PGSC0003DMT400071652 PGSC0003DMT400048225 PGSC0003DMT400048225 PGSC0003DMT400012840 PGSC0003DMT400012840 PGSC0003DMT400065364 PGSC0003DMT400065364 BCE2 BCE2 PGSC0003DMT400069263 PGSC0003DMT400069263 PGSC0003DMT400011072 PGSC0003DMT400011072 PGSC0003DMT400033754 PGSC0003DMT400033754 PGSC0003DMT400023831 PGSC0003DMT400023831
"PGSC0003DMT400012840" - 2-oxoisovalerate dehydrogenase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT4000128402-oxoisovalerate dehydrogenase (273 aa)    
Predicted Functional Partners:
PGSC0003DMT400080554
Pyruvate dehydrogenase E1 beta subunit (436 aa)
 
  0.995
PGSC0003DMT400019358
Pyruvate dehydrogenase E1 beta subunit (417 aa)
 
  0.995
PGSC0003DMT400065364
Pyruvate dehydrogenase (372 aa)
 
  0.994
PGSC0003DMT400011072
Pyruvate dehydrogenase (369 aa)
 
  0.994
PGSC0003DMT400069263
Pyruvate dehydrogenase (384 aa)
 
  0.994
BCE2
Branched-chain alpha-keto acid dehydrogenase E2 subunit (505 aa)
 
  0.981
PGSC0003DMT400033754
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase (460 aa)
 
  0.968
PGSC0003DMT400048225
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (552 aa)
 
  0.968
PGSC0003DMT400023831
Pyruvate dehydrogenase E2 subunit (464 aa)
 
  0.968
PGSC0003DMT400071652
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase (471 aa)
   
  0.955
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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