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PGSC0003DMT400004910 PGSC0003DMT400004910 PGSC0003DMT400093696 PGSC0003DMT400093696 PGSC0003DMT400097473 PGSC0003DMT400097473 PGSC0003DMT400062020 PGSC0003DMT400062020 PGSC0003DMT400091937 PGSC0003DMT400091937 PGSC0003DMT400071599 PGSC0003DMT400071599 PGSC0003DMT400051635 PGSC0003DMT400051635 PGSC0003DMT400040485 PGSC0003DMT400040485 PGSC0003DMT400012909 PGSC0003DMT400012909 PGSC0003DMT400038700 PGSC0003DMT400038700 PGSC0003DMT400004790 PGSC0003DMT400004790
"PGSC0003DMT400012909" - Linalool synthase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400012909Linalool synthase (829 aa)    
Predicted Functional Partners:
PGSC0003DMT400038700
Cytochrome P450 (511 aa)
     
 
  0.910
PGSC0003DMT400004790
Cytochrome P450 (518 aa)
     
 
  0.910
PGSC0003DMT400062020
Copalyl diphosphate synthase (587 aa)
         
 
0.900
PGSC0003DMT400051635
Copalyl diphosphate synthase (702 aa)
         
 
0.900
PGSC0003DMT400004910
Copalyl diphosphate synthase (776 aa)
         
 
0.900
PGSC0003DMT400097473
Geranyl diphosphate synthase large subunit (362 aa)
         
  0.802
PGSC0003DMT400093696
Farnesyltranstransferase (372 aa)
         
  0.802
PGSC0003DMT400091937
Farnesyltranstransferase (372 aa)
         
  0.802
PGSC0003DMT400071599
Geranylgeranyl pyrophosphate synthase 2 (375 aa)
         
  0.802
PGSC0003DMT400040485
Geranylgeranyl pyrophosphate synthase 1 (365 aa)
         
  0.802
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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