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PGSC0003DMT400072701 PGSC0003DMT400072701 METK2 METK2 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400050518 PGSC0003DMT400050518 PGSC0003DMT400047763 PGSC0003DMT400047763 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400012014 PGSC0003DMT400012014 PGSC0003DMT400037591 PGSC0003DMT400037591 PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400013116 PGSC0003DMT400013116 PGSC0003DMT400019864 PGSC0003DMT400019864
"PGSC0003DMT400013116" - CBS domain-containing protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PGSC0003DMT400013116CBS domain-containing protein (426 aa)    
Predicted Functional Partners:
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
   
   
  0.883
PGSC0003DMT400050518
50S ribosomal protein L27, chloroplastic (184 aa)
     
      0.528
PGSC0003DMT400047763
Ribosomal protein L27 (146 aa)
     
      0.528
PGSC0003DMT400037591
Ribosomal protein L27 (188 aa)
     
      0.528
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
   
   
  0.528
PGSC0003DMT400019864
Serine-threonine protein kinase, plant-type (682 aa)
           
  0.515
PGSC0003DMT400012014
Parvulin-type peptidyl prolyl cis/trans isomerase (236 aa)
         
  0.422
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
   
   
  0.415
METK2
S-adenosylmethionine synthase 2; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (390 aa)
         
  0.410
PGSC0003DMT400072701
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (390 aa)
         
  0.410
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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