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PGSC0003DMT400089861 PGSC0003DMT400089861 PGSC0003DMT400016283 PGSC0003DMT400016283 PGSC0003DMT400096814 PGSC0003DMT400096814 PGSC0003DMT400071897 PGSC0003DMT400071897 PGSC0003DMT400031288 PGSC0003DMT400031288 PGSC0003DMT400078200 PGSC0003DMT400078200 PGSC0003DMT400073077 PGSC0003DMT400073077 PGSC0003DMT400016372 PGSC0003DMT400016372 PGSC0003DMT400013119 PGSC0003DMT400013119 PGSC0003DMT400069776 PGSC0003DMT400069776 PGSC0003DMT400001869 PGSC0003DMT400001869
"PGSC0003DMT400013119" - Arf GTPase-activating domain-containing protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400013119Arf GTPase-activating domain-containing protein (208 aa)    
Predicted Functional Partners:
PGSC0003DMT400001869
Coatomer gamma subunit; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (886 aa)
     
  0.705
PGSC0003DMT400071897
Receptor protein kinase (1011 aa)
     
  0.646
PGSC0003DMT400031288
LRR receptor-like serine/threonine-protein kinase (1009 aa)
     
  0.646
PGSC0003DMT400016372
Receptor protein kinase (1005 aa)
     
  0.646
PGSC0003DMT400016283
Receptor protein kinase (828 aa)
     
  0.646
PGSC0003DMT400096814
GTP-binding protein (178 aa)
       
  0.643
PGSC0003DMT400089861
GTP-binding protein (133 aa)
       
  0.643
PGSC0003DMT400078200
RabA2 (215 aa)
       
  0.643
PGSC0003DMT400073077
GTP-binding protein (217 aa)
       
  0.643
PGSC0003DMT400069776
Conserved gene of unknown function (215 aa)
       
  0.643
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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