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PGSC0003DMT400043628 PGSC0003DMT400043628 PGSC0003DMT400056142 PGSC0003DMT400056142 PGSC0003DMT400064385 PGSC0003DMT400064385 rps4 rps4 PGSC0003DMT400081324 PGSC0003DMT400081324 PGSC0003DMT400059840 PGSC0003DMT400059840 PGSC0003DMT400049608 PGSC0003DMT400049608 PGSC0003DMT400013305 PGSC0003DMT400013305 PGSC0003DMT400046201 PGSC0003DMT400046201 PGSC0003DMT400010758 PGSC0003DMT400010758 PGSC0003DMT400050335 PGSC0003DMT400050335
"PGSC0003DMT400013305" - 40S ribosomal protein S11 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40001330540S ribosomal protein S11 (159 aa)    
Predicted Functional Partners:
PGSC0003DMT400059840
60S ribosomal protein L27 (118 aa)
   
  0.999
PGSC0003DMT400010758
60S ribosomal protein L27 (222 aa)
   
  0.999
PGSC0003DMT400056142
60S ribosomal protein L8 (260 aa)
 
  0.999
PGSC0003DMT400064385
60S ribosomal protein L8 (260 aa)
 
  0.999
PGSC0003DMT400049608
60S ribosomal protein L8 (260 aa)
 
  0.999
PGSC0003DMT400050335
Ribosomal protein (239 aa)
   
  0.999
PGSC0003DMT400043628
40S ribosomal protein S3 (102 aa)
   
  0.999
PGSC0003DMT400081324
Ribosomal protein L19 (220 aa)
   
  0.999
PGSC0003DMT400046201
Ribosomal protein L19 (214 aa)
   
  0.999
rps4
30S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (180 aa)
   
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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