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PGSC0003DMT400088828 PGSC0003DMT400088828 PGSC0003DMT400097070 PGSC0003DMT400097070 PGSC0003DMT400094045 PGSC0003DMT400094045 PGSC0003DMT400096297 PGSC0003DMT400096297 PGSC0003DMT400095716 PGSC0003DMT400095716 PGSC0003DMT400013344 PGSC0003DMT400013344 PGSC0003DMT400094391 PGSC0003DMT400094391 PGSC0003DMT400087873 PGSC0003DMT400087873 PGSC0003DMT400089964 PGSC0003DMT400089964 PGSC0003DMT400090387 PGSC0003DMT400090387 PGSC0003DMT400089836 PGSC0003DMT400089836
"PGSC0003DMT400013344" - Polygalacturonase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400013344Polygalacturonase (472 aa)    
Predicted Functional Partners:
PGSC0003DMT400097070
Pectinesterase (209 aa)
       
  0.568
PGSC0003DMT400096297
Pectinesterase (184 aa)
       
  0.568
PGSC0003DMT400095716
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (330 aa)
       
  0.568
PGSC0003DMT400094391
Pectinesterase (356 aa)
       
  0.568
PGSC0003DMT400094045
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (570 aa)
       
  0.568
PGSC0003DMT400090387
Pectinesterase (552 aa)
       
  0.568
PGSC0003DMT400089964
Pectinesterase (521 aa)
       
  0.568
PGSC0003DMT400089836
Pectinesterase PPE8B (336 aa)
       
  0.568
PGSC0003DMT400088828
Pectinesterase (248 aa)
       
  0.568
PGSC0003DMT400087873
Pectinesterase (335 aa)
       
  0.568
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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