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PGSC0003DMT400044717 PGSC0003DMT400044717 PGSC0003DMT400094929 PGSC0003DMT400094929 PGSC0003DMT400090373 PGSC0003DMT400090373 PGSC0003DMT400094562 PGSC0003DMT400094562 PGSC0003DMT400002451 PGSC0003DMT400002451 PGSC0003DMT400013355 PGSC0003DMT400013355 PGSC0003DMT400081328 PGSC0003DMT400081328 PGSC0003DMT400089725 PGSC0003DMT400089725 PGSC0003DMT400074177 PGSC0003DMT400074177 PGSC0003DMT400046202 PGSC0003DMT400046202 PGSC0003DMT400074178 PGSC0003DMT400074178
"PGSC0003DMT400013355" - Pectinesterase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400013355Pectinesterase (600 aa)    
Predicted Functional Partners:
PGSC0003DMT400074178
Polygalacturonase (405 aa)
   
 
  0.593
PGSC0003DMT400074177
Polygalacturonase (385 aa)
   
 
  0.593
PGSC0003DMT400046202
NTS1 protein (409 aa)
   
 
  0.593
PGSC0003DMT400002451
Polygalacturonase (397 aa)
   
 
  0.593
PGSC0003DMT400090373
Pollen allergen Pla o 2 (393 aa)
   
 
  0.570
PGSC0003DMT400044717
Polygalacturonase (401 aa)
   
 
  0.570
PGSC0003DMT400094929
Glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (322 aa)
       
  0.568
PGSC0003DMT400094562
Polygalacturonase (305 aa)
       
  0.568
PGSC0003DMT400089725
Pollen allergen Pla o 2 (304 aa)
       
  0.568
PGSC0003DMT400081328
Polygalacturonase (459 aa)
       
  0.568
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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