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34G 34G PGSC0003DMT400011003 PGSC0003DMT400011003 PGSC0003DMT400060984 PGSC0003DMT400060984 PGSC0003DMT400022846 PGSC0003DMT400022846 PGSC0003DMT400013647 PGSC0003DMT400013647 PGSC0003DMT400032572 PGSC0003DMT400032572 PGSC0003DMT400038206 PGSC0003DMT400038206 PGSC0003DMT400009550 PGSC0003DMT400009550 PGSC0003DMT400000592 PGSC0003DMT400000592 PGSC0003DMT400019417 PGSC0003DMT400019417 PGSC0003DMT400015074 PGSC0003DMT400015074
"PGSC0003DMT400013647" - Nucleic acid binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400013647Nucleic acid binding protein (397 aa)    
Predicted Functional Partners:
PGSC0003DMT400060984
3’-5’-exoribonuclease/RNA binding protein (329 aa)
       
    0.600
PGSC0003DMT400019417
3’-5’-exoribonuclease/RNA binding (303 aa)
       
    0.600
PGSC0003DMT400000592
Exosome complex exonuclease RRP41 (243 aa)
       
    0.587
PGSC0003DMT400032572
Exosome complex exonuclease rrp42 (288 aa)
       
    0.555
PGSC0003DMT400011003
Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease (238 aa)
     
    0.554
PGSC0003DMT400009550
5’->3’ exoribonuclease (1099 aa)
       
  0.543
PGSC0003DMT400038206
MRNA-decapping enzyme (366 aa)
       
  0.536
PGSC0003DMT400022846
Dcp1-like decapping family (364 aa)
       
  0.536
PGSC0003DMT400015074
MRNA-decapping enzyme (369 aa)
       
  0.536
34G
14-3-3 protein (259 aa)
       
    0.532
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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