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PGSC0003DMT400003507 PGSC0003DMT400003507 PGSC0003DMT400003501 PGSC0003DMT400003501 PGSC0003DMT400061587 PGSC0003DMT400061587 PGSC0003DMT400013742 PGSC0003DMT400013742 PGSC0003DMT400007684 PGSC0003DMT400007684 PGSC0003DMT400014771 PGSC0003DMT400014771 PGSC0003DMT400028972 PGSC0003DMT400028972
"PGSC0003DMT400013742" - Pentatricopeptide repeat-containing protein, mitochondrial in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400013742Pentatricopeptide repeat-containing protein, mitochondrial (208 aa)    
Predicted Functional Partners:
PGSC0003DMT400028972
DNA-directed RNA polymerase 3A, chloroplastic; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (471 aa)
     
 
  0.440
PGSC0003DMT400003507
DNA-directed RNA polymerase 2A (255 aa)
     
 
  0.440
PGSC0003DMT400003501
DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial (672 aa)
     
 
  0.440
PGSC0003DMT400014771
Surfeit locus protein (334 aa)
     
   
  0.422
PGSC0003DMT400007684
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (298 aa)
           
  0.404
PGSC0003DMT400061587
Cytochrome C oxidase assembly protein cox15 (475 aa)
     
   
  0.402
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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