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PGSC0003DMT400057595 PGSC0003DMT400057595 PGSC0003DMT400033081 PGSC0003DMT400033081 PGSC0003DMT400044280 PGSC0003DMT400044280 PGSC0003DMT400050105 PGSC0003DMT400050105 PGSC0003DMT400090250 PGSC0003DMT400090250 PGSC0003DMT400013826 PGSC0003DMT400013826 PGSC0003DMT400000985 PGSC0003DMT400000985 PGSC0003DMT400006885 PGSC0003DMT400006885 PGSC0003DMT400017726 PGSC0003DMT400017726 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400029670 PGSC0003DMT400029670
"PGSC0003DMT400013826" - Peptidyl-prolyl cis-trans isomerase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
PGSC0003DMT400013826Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (190 aa)    
Predicted Functional Partners:
PGSC0003DMT400000985
GAMYB-binding protein (601 aa)
     
  0.850
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
     
  0.846
PGSC0003DMT400044280
Pre-mRNA-splicing factor (521 aa)
     
  0.841
PGSC0003DMT400017726
XPA-binding protein (915 aa)
     
    0.833
PGSC0003DMT400006885
Protein G10 (145 aa)
     
  0.826
PGSC0003DMT400033081
U4/U6 small nuclear ribonucleoprotein Prp4 (583 aa)
       
    0.800
PGSC0003DMT400057595
Conserved gene of unknown function (580 aa)
     
  0.790
PGSC0003DMT400050105
Ankyrin repeat-containing protein (398 aa)
   
 
  0.776
PGSC0003DMT400029670
Small nuclear ribonucleoprotein (105 aa)
     
  0.771
PGSC0003DMT400090250
Nuclear protein Skip (426 aa)
     
  0.770
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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