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PGSC0003DMT400039496 PGSC0003DMT400039496 PGSC0003DMT400062136 PGSC0003DMT400062136 PGSC0003DMT400064817 PGSC0003DMT400064817 PGSC0003DMT400032914 PGSC0003DMT400032914 CER6 CER6 PGSC0003DMT400019063 PGSC0003DMT400019063 PGSC0003DMT400060224 PGSC0003DMT400060224 PGSC0003DMT400013894 PGSC0003DMT400013894
"PGSC0003DMT400013894" - Sterol desaturase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400013894Sterol desaturase (626 aa)    
Predicted Functional Partners:
PGSC0003DMT400062136
CER6 (496 aa)
     
   
  0.527
CER6
Gene of unknown function (496 aa)
     
   
  0.527
PGSC0003DMT400060224
TSC13 protein (310 aa)
           
  0.515
PGSC0003DMT400064817
Acyl CoA synthetase (659 aa)
     
   
  0.422
PGSC0003DMT400019063
Beta-ketoacyl-CoA synthase (540 aa)
           
  0.405
PGSC0003DMT400032914
3-ketoacyl-CoA reductase 1 (320 aa)
           
  0.403
PGSC0003DMT400039496
ATP-binding cassette transporter (707 aa)
     
   
  0.401
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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