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METK2 METK2 METK1 METK1 PGSC0003DMT400062273 PGSC0003DMT400062273 PGSC0003DMT400083218 PGSC0003DMT400083218 PGSC0003DMT400072701 PGSC0003DMT400072701 PGSC0003DMT400013977 PGSC0003DMT400013977 SpdSy SpdSy PGSC0003DMT400004137 PGSC0003DMT400004137 PGSC0003DMT400023446 PGSC0003DMT400023446 PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400011942 PGSC0003DMT400011942
"PGSC0003DMT400013977" - 1-aminocyclopropane-1-carboxylate synthase in Solanum tuberosum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT4000139771-aminocyclopropane-1-carboxylate synthase (373 aa)    
Predicted Functional Partners:
PGSC0003DMT400083218
Aspartate kinase (922 aa)
   
  0.937
METK2
S-adenosylmethionine synthase 2; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (390 aa)
       
  0.937
PGSC0003DMT400072701
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (390 aa)
       
  0.937
METK1
S-adenosylmethionine synthase 1; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (393 aa)
       
  0.937
PGSC0003DMT400011942
S-adenosylmethionine synthase 2; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (393 aa)
       
  0.937
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
   
  0.916
PGSC0003DMT400062273
Spermidine synthase 1 (309 aa)
   
 
  0.906
PGSC0003DMT400023446
Spermine synthase (354 aa)
   
 
  0.906
SpdSy
Spermidine synthase (347 aa)
   
 
  0.906
PGSC0003DMT400004137
Mta/sah nucleosidase (269 aa)
         
  0.901
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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