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PGSC0003DMT400077674 PGSC0003DMT400077674 PGSC0003DMT400027096 PGSC0003DMT400027096 PGSC0003DMT400072919 PGSC0003DMT400072919 PGSC0003DMT400055268 PGSC0003DMT400055268 PGSC0003DMT400055513 PGSC0003DMT400055513 PGSC0003DMT400014204 PGSC0003DMT400014204 PGSC0003DMT400061780 PGSC0003DMT400061780 PGSC0003DMT400050662 PGSC0003DMT400050662 PGSC0003DMT400000836 PGSC0003DMT400000836 PGSC0003DMT400031321 PGSC0003DMT400031321 PGSC0003DMT400046624 PGSC0003DMT400046624
"PGSC0003DMT400014204" - Ubiquitin fusion-degradation protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400014204Ubiquitin fusion-degradation protein (315 aa)    
Predicted Functional Partners:
PGSC0003DMT400061780
NPL4 family protein (411 aa)
     
  0.997
PGSC0003DMT400077674
Protein cbxX, chromosomal (479 aa)
     
  0.977
PGSC0003DMT400000836
Protein cbxX, chromosomal (483 aa)
     
  0.977
PGSC0003DMT400072919
Transitional endoplasmic reticulum ATPase (611 aa)
     
  0.977
PGSC0003DMT400055513
Transitional endoplasmic reticulum ATPase (807 aa)
     
  0.977
PGSC0003DMT400055268
26S protease regulatory subunit (349 aa)
     
  0.977
PGSC0003DMT400050662
Cell division cycle protein 48 homolog (805 aa)
     
  0.977
PGSC0003DMT400046624
Cell division cycle protein 48 (810 aa)
     
  0.977
PGSC0003DMT400031321
Cell division control protein (805 aa)
     
  0.977
PGSC0003DMT400027096
Transitional endoplasmic reticulum ATPase (808 aa)
     
  0.977
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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