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PGSC0003DMT400076704 PGSC0003DMT400076704 PGSC0003DMT400013225 PGSC0003DMT400013225 PGSC0003DMT400014388 PGSC0003DMT400014388 PGSC0003DMT400082475 PGSC0003DMT400082475 PGSC0003DMT400058116 PGSC0003DMT400058116 PGSC0003DMT400062212 PGSC0003DMT400062212 PGSC0003DMT400007520 PGSC0003DMT400007520 PGSC0003DMT400062214 PGSC0003DMT400062214 PGSC0003DMT400031956 PGSC0003DMT400031956 PGSC0003DMT400020843 PGSC0003DMT400020843 PGSC0003DMT400015849 PGSC0003DMT400015849
"PGSC0003DMT400014388" - Amsh in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PGSC0003DMT400014388Amsh (515 aa)    
Predicted Functional Partners:
PGSC0003DMT400031956
26S proteasome regulatory particle non-ATPase subunit 12 (267 aa)
     
  0.944
PGSC0003DMT400013225
Cop9 complex subunit (397 aa)
     
  0.942
PGSC0003DMT400007520
Proteasome subunit alpha type-6; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (246 aa)
     
  0.942
PGSC0003DMT400015849
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (249 aa)
     
  0.942
PGSC0003DMT400020843
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (245 aa)
     
    0.941
PGSC0003DMT400062214
26S proteasome subunit RPN7 (386 aa)
     
  0.941
PGSC0003DMT400062212
26S proteasome subunit RPN7 (143 aa)
     
  0.941
PGSC0003DMT400076704
Eukaryotic initiation factor 3E subunit; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (438 aa)
     
  0.939
PGSC0003DMT400082475
Proteasome subunit beta type-3-A; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
     
  0.938
PGSC0003DMT400058116
26S proteasome non-atpase regulatory subunit (426 aa)
     
  0.935
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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