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PGSC0003DMT400069476 PGSC0003DMT400069476 PGSC0003DMT400015857 PGSC0003DMT400015857 PGSC0003DMT400064019 PGSC0003DMT400064019 PGSC0003DMT400067463 PGSC0003DMT400067463 PGSC0003DMT400035649 PGSC0003DMT400035649 PGSC0003DMT400014493 PGSC0003DMT400014493 PGSC0003DMT400003853 PGSC0003DMT400003853 PGSC0003DMT400058889 PGSC0003DMT400058889 PGSC0003DMT400041326 PGSC0003DMT400041326 PGSC0003DMT400024213 PGSC0003DMT400024213 PGSC0003DMT400034028 PGSC0003DMT400034028
"PGSC0003DMT400014493" - Geranylgeranyl transferase type II beta subunit in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400014493Geranylgeranyl transferase type II beta subunit (283 aa)    
Predicted Functional Partners:
PGSC0003DMT400024213
Rab geranylgeranyl transferase (704 aa)
     
  0.987
PGSC0003DMT400015857
Protein farnesyltransferase alpha subunit (422 aa)
     
  0.987
PGSC0003DMT400003853
Rab escort protein (553 aa)
       
  0.956
PGSC0003DMT400069476
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (346 aa)
     
  0.953
PGSC0003DMT400035649
GDP dissociation inhibitor (444 aa)
       
  0.827
PGSC0003DMT400067463
Small GTP-binding protein (203 aa)
     
 
  0.757
PGSC0003DMT400064019
Small GTP-binding protein (202 aa)
     
 
  0.757
PGSC0003DMT400041326
Small GTP-binding protein (203 aa)
     
 
  0.757
PGSC0003DMT400034028
GTP-binding protein (203 aa)
     
 
  0.757
PGSC0003DMT400058889
Exportin-T (990 aa)
 
 
        0.582
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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