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PGSC0003DMT400059790 PGSC0003DMT400059790 PGSC0003DMT400060892 PGSC0003DMT400060892 PGSC0003DMT400017459 PGSC0003DMT400017459 PGSC0003DMT400009961 PGSC0003DMT400009961 PGSC0003DMT400054611 PGSC0003DMT400054611 PGSC0003DMT400056721 PGSC0003DMT400056721 PGSC0003DMT400014538 PGSC0003DMT400014538 PGSC0003DMT400034226 PGSC0003DMT400034226 PGSC0003DMT400034230 PGSC0003DMT400034230 PGSC0003DMT400066026 PGSC0003DMT400066026 PGSC0003DMT400034236 PGSC0003DMT400034236
"PGSC0003DMT400014538" - WD-repeat protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400014538WD-repeat protein (892 aa)    
Predicted Functional Partners:
PGSC0003DMT400034226
WD40-repeat protein (251 aa)
     
  0.999
PGSC0003DMT400009961
U3 small nucleolar RNA-associated protein (61 aa)
     
  0.999
PGSC0003DMT400017459
WD-repeat protein (907 aa)
     
0.999
PGSC0003DMT400059790
WD-repeat protein (184 aa)
     
  0.999
PGSC0003DMT400034230
WD-repeat protein (141 aa)
     
  0.999
PGSC0003DMT400054611
U3 small nucleolar RNA-interacting protein (516 aa)
     
0.999
PGSC0003DMT400066026
WD-repeat protein (950 aa)
     
0.999
PGSC0003DMT400034236
Transducin family protein (939 aa)
     
0.999
PGSC0003DMT400056721
Hepatocellular carcinoma-associated antigen (652 aa)
     
  0.999
PGSC0003DMT400060892
Nucleotide binding protein (555 aa)
     
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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