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PGSC0003DMT400012076 PGSC0003DMT400012076 PGSC0003DMT400084721 PGSC0003DMT400084721 PGSC0003DMT400066962 PGSC0003DMT400066962 PGSC0003DMT400047178 PGSC0003DMT400047178 PGSC0003DMT400033081 PGSC0003DMT400033081 PGSC0003DMT400014619 PGSC0003DMT400014619 PGSC0003DMT400073947 PGSC0003DMT400073947 PGSC0003DMT400078978 PGSC0003DMT400078978 PGSC0003DMT400078092 PGSC0003DMT400078092 PGSC0003DMT400007735 PGSC0003DMT400007735 PGSC0003DMT400060107 PGSC0003DMT400060107
"PGSC0003DMT400014619" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400014619Conserved gene of unknown function (250 aa)    
Predicted Functional Partners:
PGSC0003DMT400073947
PRP8 protein (2389 aa)
     
 
  0.934
PGSC0003DMT400047178
Pre-mRNA splicing factor (1019 aa)
     
 
  0.669
PGSC0003DMT400078978
116 kD U5 small nuclear ribonucleoprotein component (987 aa)
     
      0.668
PGSC0003DMT400066962
Mitochondrial elongation factor (760 aa)
       
      0.666
PGSC0003DMT400012076
Elongation factor G (787 aa)
       
      0.666
PGSC0003DMT400007735
Translation elongation factor (1023 aa)
       
      0.666
PGSC0003DMT400060107
80A08_4; Probable pre-rRNA processing protein involved in ribosome biogenesis (268 aa)
       
      0.603
PGSC0003DMT400084721
Binding / zinc ion binding (281 aa)
     
      0.541
PGSC0003DMT400078092
RNA binding protein (443 aa)
     
      0.541
PGSC0003DMT400033081
U4/U6 small nuclear ribonucleoprotein Prp4 (583 aa)
       
      0.457
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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