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PGSC0003DMT400080576 PGSC0003DMT400080576 PGSC0003DMT400064783 PGSC0003DMT400064783 PGSC0003DMT400023748 PGSC0003DMT400023748 PGSC0003DMT400061943 PGSC0003DMT400061943 PGSC0003DMT400014646 PGSC0003DMT400014646 PGSC0003DMT400039945 PGSC0003DMT400039945 PGSC0003DMT400062418 PGSC0003DMT400062418 PGSC0003DMT400027989 PGSC0003DMT400027989 PGSC0003DMT400055528 PGSC0003DMT400055528 PGSC0003DMT400007390 PGSC0003DMT400007390
"PGSC0003DMT400014646" - Synaptotagmin in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400014646Synaptotagmin (883 aa)    
Predicted Functional Partners:
PGSC0003DMT400039945
Exocyst complex component sec3 (200 aa)
       
      0.535
PGSC0003DMT400061943
Exocyst complex component (215 aa)
       
      0.526
PGSC0003DMT400027989
Exocyst complex component (207 aa)
       
      0.526
PGSC0003DMT400080576
Integral membrane single C2 domain protein (680 aa)
           
  0.515
PGSC0003DMT400055528
Calcium lipid binding protein (545 aa)
           
  0.515
PGSC0003DMT400062418
Conserved gene of unknown function (756 aa)
       
      0.511
PGSC0003DMT400023748
Conserved gene of unknown function (772 aa)
       
      0.511
PGSC0003DMT400007390
Conserved gene of unknown function (261 aa)
       
      0.511
PGSC0003DMT400064783
ISPH protein (461 aa)
           
  0.410
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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