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PGSC0003DMT400041871 PGSC0003DMT400041871 PGSC0003DMT400088629 PGSC0003DMT400088629 PGSC0003DMT400060895 PGSC0003DMT400060895 PGSC0003DMT400079915 PGSC0003DMT400079915 rps7 rps7 rps15 rps15 PGSC0003DMT400078112 PGSC0003DMT400078112 PGSC0003DMT400014692 PGSC0003DMT400014692 PGSC0003DMT400059174 PGSC0003DMT400059174 PGSC0003DMT400043484 PGSC0003DMT400043484 PGSC0003DMT400045932 PGSC0003DMT400045932
"PGSC0003DMT400014692" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400014692Conserved gene of unknown function (433 aa)    
Predicted Functional Partners:
PGSC0003DMT400041871
30S ribosomal protein S5 (502 aa)
     
  0.984
PGSC0003DMT400078112
Conserved gene of unknown function (452 aa)
     
  0.982
rps15
30S ribosomal protein S15, chloroplastic (87 aa)
     
    0.982
PGSC0003DMT400079915
Utp-glucose-1-phosphate uridylyltransferase (410 aa)
     
    0.981
PGSC0003DMT400059174
30S ribosomal protein S16 (112 aa)
     
    0.981
PGSC0003DMT400060895
Ribosomal protein S9 (386 aa)
     
    0.977
PGSC0003DMT400043484
Ribosomal protein S9 (210 aa)
     
    0.977
PGSC0003DMT400088629
30S ribosomal protein S7, chloroplastic (131 aa)
     
    0.964
PGSC0003DMT400045932
40S ribosomal protein S5 (210 aa)
     
    0.964
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit (145 aa)
     
    0.964
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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