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PGSC0003DMT400083480 PGSC0003DMT400083480 PGSC0003DMT400008687 PGSC0003DMT400008687 PGSC0003DMT400078454 PGSC0003DMT400078454 PGSC0003DMT400015056 PGSC0003DMT400015056 PGSC0003DMT400076182 PGSC0003DMT400076182 PGSC0003DMT400060214 PGSC0003DMT400060214 PGSC0003DMT400078228 PGSC0003DMT400078228 PGSC0003DMT400000921 PGSC0003DMT400000921 PGSC0003DMT400050335 PGSC0003DMT400050335 PGSC0003DMT400043628 PGSC0003DMT400043628 PGSC0003DMT400020871 PGSC0003DMT400020871
"PGSC0003DMT400015056" - Ribosomal protein L10a in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015056Ribosomal protein L10a (216 aa)    
Predicted Functional Partners:
PGSC0003DMT400008687
60S ribosomal protein L12 (166 aa)
 
  0.999
PGSC0003DMT400083480
60S ribosomal protein L12 (166 aa)
 
  0.999
PGSC0003DMT400020871
60S ribosomal protein L12 (166 aa)
 
  0.999
PGSC0003DMT400050335
Ribosomal protein (239 aa)
   
  0.999
PGSC0003DMT400043628
40S ribosomal protein S3 (102 aa)
   
  0.999
PGSC0003DMT400078454
60S ribosomal protein L31 (120 aa)
   
  0.999
PGSC0003DMT400000921
60S ribosomal protein L31 (120 aa)
   
  0.999
PGSC0003DMT400078228
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
   
  0.999
PGSC0003DMT400076182
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (280 aa)
   
  0.999
PGSC0003DMT400060214
P0 ribosomal protein; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
   
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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