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PGSC0003DMT400067117 PGSC0003DMT400067117 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400056625 PGSC0003DMT400056625 PGSC0003DMT400021592 PGSC0003DMT400021592 PGSC0003DMT400030280 PGSC0003DMT400030280 PGSC0003DMT400015188 PGSC0003DMT400015188 PGSC0003DMT400031258 PGSC0003DMT400031258 PGSC0003DMT400055428 PGSC0003DMT400055428 PGSC0003DMT400023035 PGSC0003DMT400023035 PGSC0003DMT400030222 PGSC0003DMT400030222 PGSC0003DMT400030176 PGSC0003DMT400030176
"PGSC0003DMT400015188" - Transcription factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015188Transcription factor (443 aa)    
Predicted Functional Partners:
PGSC0003DMT400030280
Conserved gene of unknown function (1016 aa)
     
  0.989
PGSC0003DMT400023035
Transcription factor DP, E2 dimerization partner protein (260 aa)
     
  0.984
PGSC0003DMT400021592
DP1 (356 aa)
     
  0.984
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
       
      0.949
PGSC0003DMT400067117
Cyclin A2 (497 aa)
     
  0.916
PGSC0003DMT400056625
Cyclin A3 (380 aa)
     
  0.916
PGSC0003DMT400055428
Cyclin A (368 aa)
     
  0.916
PGSC0003DMT400031258
Cyclin A (127 aa)
     
  0.916
PGSC0003DMT400030222
Cyclin A (354 aa)
     
  0.916
PGSC0003DMT400030176
Cyclin A (356 aa)
     
  0.916
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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