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PGSC0003DMT400068702 PGSC0003DMT400068702 PGSC0003DMT400027449 PGSC0003DMT400027449 PGSC0003DMT400023797 PGSC0003DMT400023797 PGSC0003DMT400067187 PGSC0003DMT400067187 PGSC0003DMT400015192 PGSC0003DMT400015192 PGSC0003DMT400009873 PGSC0003DMT400009873 PGSC0003DMT400042233 PGSC0003DMT400042233 PGSC0003DMT400022394 PGSC0003DMT400022394 PGSC0003DMT400000985 PGSC0003DMT400000985 PGSC0003DMT400023450 PGSC0003DMT400023450 PGSC0003DMT400063604 PGSC0003DMT400063604
"PGSC0003DMT400015192" - J domain-containing protein spf31 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015192J domain-containing protein spf31 (274 aa)    
Predicted Functional Partners:
PGSC0003DMT400009873
Splicing factor 3A subunit (339 aa)
     
    0.833
PGSC0003DMT400022394
Pre-mRNA-splicing factor cwc15 (231 aa)
     
 
    0.610
PGSC0003DMT400063604
PRP38 (377 aa)
     
 
    0.609
PGSC0003DMT400023450
Splicing factor 3a (509 aa)
     
 
    0.592
PGSC0003DMT400042233
Pre-mRNA branch site protein p14 (123 aa)
     
 
    0.591
PGSC0003DMT400068702
Pre-mRNA-splicing factor syf2 (310 aa)
     
 
    0.589
PGSC0003DMT400067187
Salt tolerance protein 4 (195 aa)
     
 
    0.589
PGSC0003DMT400027449
Pre-mRNA-splicing factor syf2 (298 aa)
     
 
    0.589
PGSC0003DMT400023797
Polyadenylate-binding protein (378 aa)
     
 
    0.589
PGSC0003DMT400000985
GAMYB-binding protein (601 aa)
     
 
    0.589
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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