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PGSC0003DMT400051796 PGSC0003DMT400051796 PGSC0003DMT400057824 PGSC0003DMT400057824 PGSC0003DMT400009464 PGSC0003DMT400009464 PGSC0003DMT400015241 PGSC0003DMT400015241 PGSC0003DMT400063938 PGSC0003DMT400063938 RPB1 RPB1 PGSC0003DMT400063493 PGSC0003DMT400063493 PGSC0003DMT400047222 PGSC0003DMT400047222 PGSC0003DMT400044127 PGSC0003DMT400044127 PGSC0003DMT400024498 PGSC0003DMT400024498 PGSC0003DMT400081343 PGSC0003DMT400081343
"PGSC0003DMT400015241" - Cdc2MsC in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015241Cdc2MsC (506 aa)    
Predicted Functional Partners:
RPB1
NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1839 aa)
     
  0.974
PGSC0003DMT400081343
Cyclin-L1 (400 aa)
     
  0.973
PGSC0003DMT400044127
Cyclin-dependent protein kinase (424 aa)
     
  0.973
PGSC0003DMT400063493
CAK associated cyclinH homolog (335 aa)
     
  0.915
PGSC0003DMT400024498
CAK associated cyclinH homolog (327 aa)
     
  0.915
PGSC0003DMT400063938
Suppressor of ty (847 aa)
     
  0.905
PGSC0003DMT400047222
DNA-directed RNA polymerase (875 aa)
     
  0.905
PGSC0003DMT400051796
Cyclin-C1-2 (250 aa)
     
  0.836
PGSC0003DMT400057824
Cyclin-L2 (448 aa)
     
  0.834
PGSC0003DMT400009464
Cyclin-L2 (241 aa)
     
  0.834
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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