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PGSC0003DMT400055209 PGSC0003DMT400055209 PGSC0003DMT400063196 PGSC0003DMT400063196 PGSC0003DMT400009093 PGSC0003DMT400009093 PGSC0003DMT400063200 PGSC0003DMT400063200 PGSC0003DMT400009607 PGSC0003DMT400009607 PGSC0003DMT400023968 PGSC0003DMT400023968 PGSC0003DMT400015411 PGSC0003DMT400015411 PGSC0003DMT400060883 PGSC0003DMT400060883 PGSC0003DMT400079746 PGSC0003DMT400079746 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400032970 PGSC0003DMT400032970
"PGSC0003DMT400015411" - Adenylate isopentenyltransferase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400015411Adenylate isopentenyltransferase (278 aa)    
Predicted Functional Partners:
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
         
  0.679
PGSC0003DMT400063200
Pyridoxamine 5-phosphate oxidase (525 aa)
         
  0.576
PGSC0003DMT400063196
Pyridoxamine 5-phosphate oxidase (353 aa)
         
  0.576
PGSC0003DMT400060883
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (502 aa)
   
 
  0.576
PGSC0003DMT400032970
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (500 aa)
   
 
  0.576
PGSC0003DMT400079746
Polysialic acid capsule expression protein kpsF (342 aa)
   
 
  0.562
PGSC0003DMT400055209
GTP-binding protein hflx (613 aa)
   
   
  0.559
PGSC0003DMT400009607
GTP-binding protein hflx (554 aa)
   
   
  0.559
PGSC0003DMT400023968
Radical sam protein (372 aa)
   
   
  0.550
PGSC0003DMT400009093
CDK5 regulatory subunit-associated protein (626 aa)
   
   
  0.550
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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