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PGSC0003DMT400034028 PGSC0003DMT400034028 PGSC0003DMT400057423 PGSC0003DMT400057423 PGSC0003DMT400064019 PGSC0003DMT400064019 PGSC0003DMT400067463 PGSC0003DMT400067463 PGSC0003DMT400072222 PGSC0003DMT400072222 PGSC0003DMT400041326 PGSC0003DMT400041326 PGSC0003DMT400015659 PGSC0003DMT400015659 PGSC0003DMT400072666 PGSC0003DMT400072666 PGSC0003DMT400019238 PGSC0003DMT400019238 PGSC0003DMT400050774 PGSC0003DMT400050774 PGSC0003DMT400055259 PGSC0003DMT400055259
"PGSC0003DMT400015659" - PRA1 family protein D in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015659PRA1 family protein D (168 aa)    
Predicted Functional Partners:
PGSC0003DMT400067463
Small GTP-binding protein (203 aa)
       
 
  0.705
PGSC0003DMT400064019
Small GTP-binding protein (202 aa)
       
 
  0.705
PGSC0003DMT400041326
Small GTP-binding protein (203 aa)
       
 
  0.705
PGSC0003DMT400034028
GTP-binding protein (203 aa)
       
 
  0.705
PGSC0003DMT400072666
Glutamate-ammonia ligase (847 aa)
       
      0.632
PGSC0003DMT400055259
Guanine nucleotide regulatory protein (200 aa)
       
 
  0.544
PGSC0003DMT400050774
GTP binding protein (200 aa)
       
 
  0.544
PGSC0003DMT400019238
RAB5B (200 aa)
       
 
  0.544
PGSC0003DMT400072222
SNARE domain containing protein (231 aa)
       
      0.532
PGSC0003DMT400057423
Syntaxin-51 (233 aa)
       
      0.532
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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