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PGSC0003DMT400011584 PGSC0003DMT400011584 PGSC0003DMT400047329 PGSC0003DMT400047329 PGSC0003DMT400037190 PGSC0003DMT400037190 PGSC0003DMT400037606 PGSC0003DMT400037606 PGSC0003DMT400044453 PGSC0003DMT400044453 PGSC0003DMT400080700 PGSC0003DMT400080700 PGSC0003DMT400011175 PGSC0003DMT400011175 PGSC0003DMT400008281 PGSC0003DMT400008281 PGSC0003DMT400028259 PGSC0003DMT400028259 PGSC0003DMT400015682 PGSC0003DMT400015682 PGSC0003DMT400012542 PGSC0003DMT400012542
"PGSC0003DMT400015682" - Membrin 11 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015682Membrin 11 (252 aa)    
Predicted Functional Partners:
PGSC0003DMT400012542
25.3 kDa vesicle transport protein (218 aa)
     
  0.996
PGSC0003DMT400037606
Syntaxin (340 aa)
     
  0.996
PGSC0003DMT400011584
Syntaxin (352 aa)
     
  0.996
PGSC0003DMT400037190
R-SNARE, SEC22-family (219 aa)
     
  0.996
PGSC0003DMT400011175
25.3 kDa vesicle transport protein (247 aa)
     
  0.996
PGSC0003DMT400080700
Bet1-like snare 1-1 (187 aa)
     
  0.996
PGSC0003DMT400044453
Bet1-like SNARE 1-2 (133 aa)
     
  0.996
PGSC0003DMT400028259
Bet1-like snare 1-1 (122 aa)
     
  0.996
PGSC0003DMT400047329
Syntaxin (335 aa)
     
  0.996
PGSC0003DMT400008281
NTGP1 (199 aa)
     
  0.985
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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