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PGSC0003DMT400019938 PGSC0003DMT400019938 PGSC0003DMT400083821 PGSC0003DMT400083821 PGSC0003DMT400078986 PGSC0003DMT400078986 PGSC0003DMT400002741 PGSC0003DMT400002741 PGSC0003DMT400015780 PGSC0003DMT400015780 PGSC0003DMT400074135 PGSC0003DMT400074135 PGSC0003DMT400088246 PGSC0003DMT400088246 PGSC0003DMT400067870 PGSC0003DMT400067870 PGSC0003DMT400071379 PGSC0003DMT400071379 PGSC0003DMT400075253 PGSC0003DMT400075253 PGSC0003DMT400061888 PGSC0003DMT400061888
"PGSC0003DMT400015780" - Ubiquitin-conjugating enzyme E2 23 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015780Ubiquitin-conjugating enzyme E2 23 (1160 aa)    
Predicted Functional Partners:
PGSC0003DMT400074135
WD-repeat protein (584 aa)
     
      0.578
PGSC0003DMT400019938
WD-repeat protein (466 aa)
     
      0.571
PGSC0003DMT400083821
Ring finger protein (401 aa)
     
  0.563
PGSC0003DMT400002741
Ring finger protein (419 aa)
     
  0.563
PGSC0003DMT400088246
Conserved gene of unknown function (1328 aa)
     
   
  0.542
PGSC0003DMT400061888
Conserved gene of unknown function (1122 aa)
     
   
  0.542
PGSC0003DMT400075253
Pentatricopeptide repeat-containing protein, mitochondrial (654 aa)
           
  0.515
PGSC0003DMT400067870
Myosin heavy chain (588 aa)
           
  0.515
PGSC0003DMT400078986
Zinc finger family protein (198 aa)
     
  0.480
PGSC0003DMT400071379
Cleavage and polyadenylation specificity factor (383 aa)
     
  0.454
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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