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PGSC0003DMT400084699 PGSC0003DMT400084699 PGSC0003DMT400084697 PGSC0003DMT400084697 PGSC0003DMT400081173 PGSC0003DMT400081173 PGSC0003DMT400015943 PGSC0003DMT400015943 PGSC0003DMT400012556 PGSC0003DMT400012556 RCA RCA PGSC0003DMT400012452 PGSC0003DMT400012452 PGSC0003DMT400023656 PGSC0003DMT400023656 PGSC0003DMT400028767 PGSC0003DMT400028767 PGSC0003DMT400036879 PGSC0003DMT400036879 PGSC0003DMT400091016 PGSC0003DMT400091016
"PGSC0003DMT400015943" - 26S proteasome regulatory complex ATPase RPT3 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40001594326S proteasome regulatory complex ATPase RPT3 (103 aa)    
Predicted Functional Partners:
PGSC0003DMT400012556
26S protease regulatory subunit (69 aa)
     
  0.999
PGSC0003DMT400012452
26S protease regulatory subunit (119 aa)
     
  0.999
PGSC0003DMT400091016
Rubisco activase (184 aa)
     
  0.999
PGSC0003DMT400084699
26S proteasome AAA-ATPase subunit RPT4a (61 aa)
     
  0.999
PGSC0003DMT400084697
26S proteasome AAA-ATPase subunit RPT4a (72 aa)
     
  0.999
PGSC0003DMT400081173
26S protease regulatory subunit S10b (119 aa)
     
  0.999
RCA
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (437 aa)
     
  0.999
PGSC0003DMT400036879
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast (294 aa)
     
  0.999
PGSC0003DMT400028767
Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic (438 aa)
     
  0.999
PGSC0003DMT400023656
26S protease regulatory subunit 7 homolog A (428 aa)
     
0.998
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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