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PGSC0003DMT400016842 PGSC0003DMT400016842 PGSC0003DMT400056917 PGSC0003DMT400056917 PGSC0003DMT400065320 PGSC0003DMT400065320 PGSC0003DMT400060032 PGSC0003DMT400060032 PGSC0003DMT400015969 PGSC0003DMT400015969 PGSC0003DMT400078207 PGSC0003DMT400078207 PGSC0003DMT400045039 PGSC0003DMT400045039 PGSC0003DMT400000500 PGSC0003DMT400000500 PGSC0003DMT400033276 PGSC0003DMT400033276 PGSC0003DMT400045040 PGSC0003DMT400045040 PGSC0003DMT400065314 PGSC0003DMT400065314
"PGSC0003DMT400015969" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015969Conserved gene of unknown function (346 aa)    
Predicted Functional Partners:
PGSC0003DMT400016842
Conserved gene of unknown function (735 aa)
     
 
  0.797
PGSC0003DMT400078207
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.783
PGSC0003DMT400045040
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (234 aa)
     
 
  0.680
PGSC0003DMT400045039
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (135 aa)
     
 
  0.680
PGSC0003DMT400033276
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (889 aa)
     
 
  0.680
PGSC0003DMT400000500
Origin recognition complex 5 subunit (539 aa)
     
 
  0.612
PGSC0003DMT400065320
DNA repair protein RAD51 homolog 2 (69 aa)
     
 
  0.609
PGSC0003DMT400065314
DNA repair protein RAD51 homolog 2 (219 aa)
     
 
  0.609
PGSC0003DMT400060032
DNA repair protein recA homolog 3, mitochondrial (461 aa)
     
 
  0.609
PGSC0003DMT400056917
Replicase (419 aa)
     
 
  0.609
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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