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PGSC0003DMT400081386 PGSC0003DMT400081386 PGSC0003DMT400084284 PGSC0003DMT400084284 PGSC0003DMT400091014 PGSC0003DMT400091014 PGSC0003DMT400076066 PGSC0003DMT400076066 PGSC0003DMT400056692 PGSC0003DMT400056692 PGSC0003DMT400015994 PGSC0003DMT400015994 PGSC0003DMT400054796 PGSC0003DMT400054796 PGSC0003DMT400025743 PGSC0003DMT400025743 PGSC0003DMT400001911 PGSC0003DMT400001911 PGSC0003DMT400054904 PGSC0003DMT400054904 PGSC0003DMT400054911 PGSC0003DMT400054911
"PGSC0003DMT400015994" - Verticillium wilt disease resistance protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400015994Verticillium wilt disease resistance protein (494 aa)    
Predicted Functional Partners:
PGSC0003DMT400056692
ATP-dependent RNA helicase (1141 aa)
     
  0.749
PGSC0003DMT400076066
Splicing factor 3B subunit (234 aa)
     
  0.744
PGSC0003DMT400084284
Adenylyl cyclase-associated protein (471 aa)
       
  0.736
PGSC0003DMT400001911
Adenylyl cyclase-associated protein (471 aa)
       
  0.736
PGSC0003DMT400025743
Endoplasmin homolog (806 aa)
       
  0.727
PGSC0003DMT400091014
Small glutamine-rich tetratricopeptide repeat-containing protein A (607 aa)
     
  0.699
PGSC0003DMT400054911
Small glutamine-rich tetratricopeptide repeat-containing protein A (521 aa)
     
  0.699
PGSC0003DMT400054904
Small glutamine-rich tetratricopeptide repeat-containing protein A (604 aa)
     
  0.699
PGSC0003DMT400054796
Small glutamine-rich tetratricopeptide repeat-containing protein A (615 aa)
     
  0.699
PGSC0003DMT400081386
U1snRNP-specific protein, U1A (253 aa)
     
  0.693
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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