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PGSC0003DMT400029338 PGSC0003DMT400029338 PGSC0003DMT400082384 PGSC0003DMT400082384 PGSC0003DMT400016081 PGSC0003DMT400016081 PGSC0003DMT400072227 PGSC0003DMT400072227 PGSC0003DMT400067022 PGSC0003DMT400067022 PGSC0003DMT400009595 PGSC0003DMT400009595 PGSC0003DMT400072856 PGSC0003DMT400072856 PGSC0003DMT400052100 PGSC0003DMT400052100 PGSC0003DMT400056930 PGSC0003DMT400056930 PGSC0003DMT400058484 PGSC0003DMT400058484
"PGSC0003DMT400016081" - WD-repeat protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400016081WD-repeat protein (467 aa)    
Predicted Functional Partners:
PGSC0003DMT400052100
26S proteasome regulatory subunit S3 (428 aa)
       
      0.677
PGSC0003DMT400056930
COP9 signalosome complex subunit 6b (115 aa)
       
 
  0.638
PGSC0003DMT400029338
Signalosome subunit (311 aa)
       
 
  0.638
PGSC0003DMT400082384
Cop9 signalosome complex subunit (439 aa)
       
 
  0.624
PGSC0003DMT400072227
Cop9 signalosome complex subunit (439 aa)
       
 
  0.624
PGSC0003DMT400058484
Cop9 signalosome complex subunit (478 aa)
       
 
  0.624
PGSC0003DMT400067022
COP9 signalosome complex subunit 7 (296 aa)
       
      0.525
PGSC0003DMT400072856
26S proteasome subunit S9 (423 aa)
       
      0.517
PGSC0003DMT400009595
DNA damage-binding protein 1 (261 aa)
       
 
  0.414
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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