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PGSC0003DMT400036620 PGSC0003DMT400036620 PGSC0003DMT400096830 PGSC0003DMT400096830 PGSC0003DMT400094861 PGSC0003DMT400094861 PGSC0003DMT400089988 PGSC0003DMT400089988 PGSC0003DMT400086131 PGSC0003DMT400086131 PGSC0003DMT400016255 PGSC0003DMT400016255 PGSC0003DMT400073328 PGSC0003DMT400073328 PGSC0003DMT400015091 PGSC0003DMT400015091 PGSC0003DMT400058832 PGSC0003DMT400058832 PGSC0003DMT400050487 PGSC0003DMT400050487 PGSC0003DMT400042215 PGSC0003DMT400042215
"PGSC0003DMT400016255" - Pumilio in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400016255Pumilio (1025 aa)    
Predicted Functional Partners:
PGSC0003DMT400096830
Ccr4-associated factor (274 aa)
       
 
  0.705
PGSC0003DMT400094861
Ccr4-associated factor (178 aa)
       
 
  0.705
PGSC0003DMT400089988
Ccr4-associated factor (273 aa)
       
 
  0.705
PGSC0003DMT400086131
Ccr4-associated factor (274 aa)
       
 
  0.705
PGSC0003DMT400073328
Ccr4-associated factor (273 aa)
       
 
  0.705
PGSC0003DMT400058832
Ccr4-associated factor (274 aa)
       
 
  0.705
PGSC0003DMT400050487
CCR4-associated factor (285 aa)
       
 
  0.705
PGSC0003DMT400042215
Ccr4-associated factor (285 aa)
       
 
  0.705
PGSC0003DMT400036620
Ccr4-associated factor (274 aa)
       
 
  0.705
PGSC0003DMT400015091
CCR4-associated factor (267 aa)
       
 
  0.705
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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