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PGSC0003DMT400060425 PGSC0003DMT400060425 PGSC0003DMT400063796 PGSC0003DMT400063796 PGSC0003DMT400020680 PGSC0003DMT400020680 PGSC0003DMT400029873 PGSC0003DMT400029873 xt1 xt1 PGSC0003DMT400016321 PGSC0003DMT400016321 PGSC0003DMT400037513 PGSC0003DMT400037513 PGSC0003DMT400037320 PGSC0003DMT400037320 PGSC0003DMT400001086 PGSC0003DMT400001086
"PGSC0003DMT400016321" - Beta3-glucuronyltransferase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400016321Beta3-glucuronyltransferase (318 aa)    
Predicted Functional Partners:
PGSC0003DMT400037513
Conserved gene of unknown function (416 aa)
     
   
  0.515
PGSC0003DMT400020680
Glycogenin (579 aa)
           
  0.515
PGSC0003DMT400060425
Glycogenin (533 aa)
           
  0.416
PGSC0003DMT400029873
Glycogenin (533 aa)
           
  0.416
PGSC0003DMT400037320
Glycosyltransferase, CAZy family GT8 (533 aa)
     
   
  0.411
PGSC0003DMT400063796
Glycogenin (648 aa)
           
  0.406
xt1
Beta-1,2-xylosyltransferase (522 aa)
     
   
  0.404
PGSC0003DMT400001086
Transferase (433 aa)
           
  0.403
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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