Full Link:
STRINGSTRING
PGSC0003DMT400004868 PGSC0003DMT400004868 PGSC0003DMT400050546 PGSC0003DMT400050546 PGSC0003DMT400031664 PGSC0003DMT400031664 PGSC0003DMT400000336 PGSC0003DMT400000336 PGSC0003DMT400016878 PGSC0003DMT400016878 PGSC0003DMT400018139 PGSC0003DMT400018139 PGSC0003DMT400023562 PGSC0003DMT400023562 PGSC0003DMT400018507 PGSC0003DMT400018507
"PGSC0003DMT400016878" - Transferase, transferring glycosyl groups in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400016878Transferase, transferring glycosyl groups (379 aa)    
Predicted Functional Partners:
PGSC0003DMT400031664
Ubiquitin (583 aa)
     
   
  0.601
PGSC0003DMT400023562
Ubiquitin (580 aa)
     
   
  0.601
PGSC0003DMT400018139
Phosphatidylinositol 3-and 4-kinase family protein (568 aa)
     
   
  0.601
PGSC0003DMT400000336
Phosphatidylinositol 3-and 4-kinase family protein (571 aa)
     
   
  0.601
PGSC0003DMT400050546
Inositol or phosphatidylinositol kinase (628 aa)
     
   
  0.464
PGSC0003DMT400018507
Inositol or phosphatidylinositol kinase (566 aa)
     
   
  0.464
PGSC0003DMT400004868
Inositol or phosphatidylinositol kinase (627 aa)
     
   
  0.464
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)