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PGSC0003DMT400086522 PGSC0003DMT400086522 PGSC0003DMT400093989 PGSC0003DMT400093989 PGSC0003DMT400016885 PGSC0003DMT400016885 PGSC0003DMT400066026 PGSC0003DMT400066026 PGSC0003DMT400050052 PGSC0003DMT400050052 PGSC0003DMT400054611 PGSC0003DMT400054611 PGSC0003DMT400059790 PGSC0003DMT400059790 PGSC0003DMT400034236 PGSC0003DMT400034236 PGSC0003DMT400001044 PGSC0003DMT400001044 PGSC0003DMT400042226 PGSC0003DMT400042226 PGSC0003DMT400008925 PGSC0003DMT400008925
"PGSC0003DMT400016885" - RNA 3' terminal phosphate cyclase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400016885RNA 3’ terminal phosphate cyclase (218 aa)    
Predicted Functional Partners:
PGSC0003DMT400054611
U3 small nucleolar RNA-interacting protein (516 aa)
     
  0.993
PGSC0003DMT400050052
Conserved gene of unknown function (387 aa)
     
  0.988
PGSC0003DMT400093989
U3 small nucleolar RNA-associated protein (533 aa)
     
 
  0.988
PGSC0003DMT400086522
U3 small nucleolar RNA-associated protein (103 aa)
     
 
  0.988
PGSC0003DMT400008925
U3 small nucleolar RNA-associated protein (243 aa)
     
 
  0.988
PGSC0003DMT400042226
U3 small nucleolar ribonucleoprotein protein imp4 (324 aa)
     
 
  0.988
PGSC0003DMT400001044
U3 small nucleolar ribonucleoprotein protein imp4 (167 aa)
     
 
  0.988
PGSC0003DMT400066026
WD-repeat protein (950 aa)
     
 
  0.987
PGSC0003DMT400059790
WD-repeat protein (184 aa)
     
 
  0.987
PGSC0003DMT400034236
Transducin family protein (939 aa)
     
 
  0.987
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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