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PGSC0003DMT400012338 PGSC0003DMT400012338 PGSC0003DMT400081368 PGSC0003DMT400081368 PGSC0003DMT400083086 PGSC0003DMT400083086 PGSC0003DMT400050252 PGSC0003DMT400050252 PGSC0003DMT400001574 PGSC0003DMT400001574 PGSC0003DMT400005490 PGSC0003DMT400005490 PHYB PHYB PHYA PHYA PGSC0003DMT400016935 PGSC0003DMT400016935 PGSC0003DMT400035914 PGSC0003DMT400035914 PGSC0003DMT400075345 PGSC0003DMT400075345
"PGSC0003DMT400016935" - EARLY flowering 4 protein in Solanum tuberosum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400016935EARLY flowering 4 protein (111 aa)    
Predicted Functional Partners:
PGSC0003DMT400075345
Early flowering 3 (719 aa)
     
 
  0.772
PGSC0003DMT400035914
Early flowering 3 (656 aa)
     
 
  0.772
PGSC0003DMT400012338
Conserved gene of unknown function (653 aa)
     
 
  0.772
PGSC0003DMT400083086
Sensory transduction histidine kinase (549 aa)
     
 
  0.662
PGSC0003DMT400050252
Pseudo response regulator (551 aa)
     
 
  0.662
PGSC0003DMT400005490
NbPCL1 protein (302 aa)
     
 
  0.621
PHYA
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reducta [...] (1123 aa)
       
 
  0.593
PHYB
Phytochrome B; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reducta [...] (1130 aa)
       
 
  0.581
PGSC0003DMT400001574
Pseudo-response regulator 5 (683 aa)
     
 
  0.552
PGSC0003DMT400081368
ATP binding protein (1703 aa)
       
 
  0.494
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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